MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Escherichia coli 19428wD4_HM13

Change genome:

from a total of 52 genomes

Available tools:

Quick search:

(leave empty to show all)

NCBI Genome Annotation:

contigs: 110

bases: 5,033,648 bps

CDS: 4,754

rRNA: 21

tRNA: 78

tmRNA: 1

Total number of protein coding genes annotated/found: 4,625

Display 20 50 100 All items per page

Items 1 - 20

🡆

click arrow to navigate by page or

of 232 pages

Molecule ^	PID/GenBank ID *^	Sequences	Size (NA/AA) ^	Range	Gene Product Name
SEQF5033\|JADGMH010000001.1	MBF0788379.1	NA AA	1773/591	1-1774	type VI secretion system tip protein VgrG
SEQF5033\|JADGMH010000004.1	MBF0789642.1	NA AA	159/53	1-161	DUF945 domain-containing protein
SEQF5033\|JADGMH010000007.1	MBF0790524.1	NA AA	927/309	1-927	restriction endonuclease subunit S
SEQF5033\|JADGMH010000014.1	MBF0791653.1	NA AA	732/244	1-732	NTPase
SEQF5033\|JADGMH010000019.1	MBF0792167.1	NA AA	822/274	1-822	toxic metabolite efflux MATE transporter YeeO
SEQF5033\|JADGMH010000021.1	MBF0792329.1	NA AA	1104/368	1-1106	bifunctional metallophosphatase/5'-nucleotidase
SEQF5033\|JADGMH010000024.1	MBF0792531.1	NA AA	5004/1668	1-5006	autotransporter domain-containing protein
SEQF5033\|JADGMH010000025.1	MBF0792570.1	NA AA	558/186	1-558	replication/maintenance protein RepL
SEQF5033\|JADGMH010000028.1	MBF0792690.1	NA AA	189/63	1-189	IS4 family transposase
SEQF5033\|JADGMH010000030.1	MBF0792745.1	NA AA	657/219	1-659	glutamate decarboxylase
SEQF5033\|JADGMH010000034.1	MBF0792840.1	NA AA	159/53	1-161	DUF945 domain-containing protein
SEQF5033\|JADGMH010000044.1	MBF0792917.1	NA AA	345/115	1-345	type IV secretion system protein
SEQF5033\|JADGMH010000046.1	MBF0792923.1	NA AA	1218/406	1-1219	GGDEF domain-containing protein
SEQF5033\|JADGMH010000053.1	MBF0792942.1	NA AA	1305/435	1-1306	MobA/MobL family protein
SEQF5033\|JADGMH010000060.1	MBF0792960.1	NA AA	318/106	1-318	hypothetical protein
SEQF5033\|JADGMH010000068.1	MBF0792973.1	NA AA	905/301	1-905	elongation factor Tu
SEQF5033\|JADGMH010000070.1	MBF0792975.1	NA AA	273/91	1-274	GTPase family protein
SEQF5033\|JADGMH010000073.1	MBF0792977.1	NA AA	587/195	1-587	glutamate decarboxylase
SEQF5033\|JADGMH010000079.1	MBF0792981.1	NA AA	482/160	1-482	NeuE protein
SEQF5033\|JADGMH010000082.1	MBF0792984.1	NA AA	390/130	1-391	glycosyl transferase

Items 1 - 20

🡆

click arrow to navigate by page or

of 232 pages

JBrowse Genome Viewer
* Click GI,UID,Gene Product to go to NCBI record
^ Click column names to toggle sorting

Page last updated: July 7, 2021 08:39:35